Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902918.1_cds_XP_016452921.1_47100
CDS Infomation

[gene=LOC107777425] [db_xref=GeneID:107777425] [protein=U-box domain-containing protein 4-like] [protein_id=XP_016452921.1] [location=join(31252..32517,33598..33660)] [gbkey=CDS]
Sequence

ATGGTTTTCCTGGAAAATTCTCATTCTCATGTGTCTTCTACTACCCAAACACGGCCTAAT
TATTACTACACTCCACCACCTTCCTCTACCAAAGCCCACCGTTCACTTGGCCGGTCCATG
CGCACTATTCGGTCCACTCTGTACCAAGCGGAAACTAACTCCGGCCCGGTTTACGAGAAT
CTCACAGATTCCATTGTCGATTTTCGGCTCAGCGAGCTCGCAAAAAAACCGCCGCCGCCG
ATTCATAAATCTGACGTGGATTTTCTGGAACTTTCTAGATCTTTCAGTGATTTCTCGGCG
TGTAGCAGTGATATCTCCGGCGAGTTGGAACGTCTCGCGCAGGTTCCAATTTCGGATCAG
AACTGGAGCTCCGAAACCGAACCTGAACCTTGCGTGGGATTTCTAGAGAGAGATTCGTTT
TCAACGGAGATAATAGAGAGTATTGAACCGGAAGATCTTCAGCCGACGGTGAAACTCTGC
GTCGACAGTTTAAAGTCACTGTCGGCGGCCGTGAAGAGATCGGCGGCAGCGAAATTGAGG
CTCTTAGCAAAGAACCGAGCTGAAAATCGCGCATTAATCGGCGAGTCTGGCGCGGTTCCG
GCATTGTTGCCGCTCCTCCGGTGCTCCGATCCGTGGACTCAGGAACACGCCGTAACGGCG
CTCCTCAATCTCTCGCTTCACGAGCCGAACAAAACCCTAATTACAAATTCTGGAGCTATA
AAATCCCTCATTTACGTTTTAAAAACGGGGACGGAAACGTCCAAGCAAAATGCAGCTTGT
GCTCTGTTAAGTTTAGCTTTGATCGATGAAAATAAGCTCTCAATCGGTGCTTGTGGTGCT
ATTGCGCCGTTAGTTGCTCTGTTAATTAACGGAACAAATCGGGGTAAAAAGGATGCATTA
ACAACGCTGTATAAGTTGTGTACAGTGAGGTTGAATAAAGAGCGGGCCGTGAATGCGGGT
GCTGTGAAGCCGTTAGTGGGGTTAGTGTGTGAGGAGGGTGGAGGGTTAGCCGAGAAGGCT
ATGGTGGTGTTGAGTAGCTTAGCGGGGATTGAGACGGGGAGAGAAGAGATTATTGAGGAA
GGTGGGATTGGTGCACTGGTGGAAGTGATTGAAGATGGAAGTAACAAAGGGAAGGAATTT
GCAGTGGTGACGCTTTTGCAGCTGTGTGTTGACAGTGTGTGGAATAGAGGGATTCTTGTT
AGGGAAGGAGGGATTCCTCCTCTTGTTGCCTTGTCGCAGAATGGAACTGCTAAAGCTAAG
CATAAGGCGGAAACGTTACTCGGATACTTGAGGGAACCAAGACAAGAAGTTTCTACTTCA
ACTCCTTAG

Peptide Sequence

PEP ID

XP_016452921.1
PEP Infomation

PREDICTED: U-box domain-containing protein 4-like [Nicotiana tabacum]
Sequence

MVFLENSHSHVSSTTQTRPNYYYTPPPSSTKAHRSLGRSMRTIRSTLYQAETNSGPVYEN
LTDSIVDFRLSELAKKPPPPIHKSDVDFLELSRSFSDFSACSSDISGELERLAQVPISDQ
NWSSETEPEPCVGFLERDSFSTEIIESIEPEDLQPTVKLCVDSLKSLSAAVKRSAAAKLR
LLAKNRAENRALIGESGAVPALLPLLRCSDPWTQEHAVTALLNLSLHEPNKTLITNSGAI
KSLIYVLKTGTETSKQNAACALLSLALIDENKLSIGACGAIAPLVALLINGTNRGKKDAL
TTLYKLCTVRLNKERAVNAGAVKPLVGLVCEEGGGLAEKAMVVLSSLAGIETGREEIIEE
GGIGALVEVIEDGSNKGKEFAVVTLLQLCVDSVWNRGILVREGGIPPLVALSQNGTAKAK
HKAETLLGYLREPRQEVSTSTP

Transcript Sequence

Gene sequence data has not been registered.